Latest publications

Hemidesmosome integrity protects the colon against colitis and colorectal cancer.

  • Clinical Proteomics
October 01, 2017
2017 Oct. Gut.66(10):1748-1760. Epub 2016 Jul 1.
By:
  • De Arcangelis A
  • Hamade H
  • Alpy F
  • Normand S
  • Bruyere E
  • Lefebvre O
  • Mechine-Neuville A
  • Siebert S
  • Pfister V
  • Lepage P
  • Laquerriere P
  • Dembele D
  • Delanoye-Crespin A
  • Rodius S
  • Robine S
  • Kedinger M
  • Van Seuningen I
  • Simon-Assmann P
  • Chamaillard M
  • Labouesse M
  • Georges-Labouesse E.

Cell-free DNA and next-generation sequencing in the service of personalized medicine for lung cancer.

  • Clinical Proteomics
October 25, 2016
2016 Oct. Oncotarget.7(43):71013-71035.
By:
  • Bennett CW
  • Berchem G
  • Kim YJ
  • El-Khoury V.

Analysis of the dynamic co-expression network of heart regeneration in the zebrafish.

  • Bioinformatics and Modelling
  • Genomics Center
  • Clinical Proteomics
  • NORLUX-Glioma Biology
May 31, 2016
2016 May. Sci Rep.6:26822.
By:
  • Rodius S
  • Androsova G
  • Gotz L
  • Liechti R
  • Crespo I
  • Merz S
  • Nazarov PV
  • de Klein N
  • Jeanty C
  • Gonzalez-Rosa JM
  • Muller A
  • Bernardin F
  • Niclou SP
  • Vallar L
  • Mercader N
  • Ibberson M
  • Xenarios I
  • Azuaje F.

Chapter 12 - Regulation of autophagy in chronic lymphocytic leukemia: The role of Histone Deacetylase Inhibitors. In Autophagy: Cancer, Other Pathologies, Inflammation, Immunity, Infection, and Aging. (Book Chapter)

  • Clinical Proteomics
April 08, 2016
2016 Apr. Academic Press, 2016. p.221–240. (Vol. 9). ISBN 978-0-12-802936-7.
By:
  • El-Khoury V
  • Berchem G.

The use of proteases complementary to trypsin to probe isoforms and modifications.

  • Discovery Proteomics
  • Clinical Proteomics
March 01, 2016
2016 Mar. Proteomics.16(5):715-28.
By:
  • Trevisiol S
  • Ayoub D
  • Lesur A
  • Ancheva L
  • Gallien S
  • Domon B.

Assessing cellular and circulating miRNA recovery: the impact of the RNA isolation method and the quantity of input material.

  • Clinical Proteomics
  • Genomics Center
January 20, 2016
2016 Jan. Sci Rep.6:19529.
By:
  • El-Khoury V
  • Pierson S
  • Kaoma T
  • Bernardin F
  • Berchem G.

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).

  • Clinical Proteomics
  • Tumor Microenvironment
January 02, 2016
2016 Jan. Autophagy.12(1):1-222.
By:
  • Klionsky D
  • Abdelmohsenn K
  • Abe A
  • Abedin M
  • et al (incl. El-Khoury V Janji B and Berchem G).

Quantification of SAA1 and SAA2 in Lung Cancer Plasma Using the Isotype-specific PRM Assays.

  • Clinical Proteomics
  • Discovery Proteomics
September 01, 2015
2015 Sep. Proteomics.15(18):3116-25. Epub 2015 Aug 17.
By:
  • Kim YJ
  • Gallien S
  • El-Khoury V
  • Goswami P
  • Sertamo K
  • Schlesser M
  • Berchem G
  • Domon B.

Exosomes released by chronic lymphocytic leukemia cells induce the transition of stromal cells into cancer-associated fibroblasts.

  • Tumor Stroma Interactions
  • Tumor Microenvironment
  • Discovery Proteomics
  • Clinical Proteomics
August 27, 2015
2015 Aug. Blood.126(9):1106-17. Epub 2015 Jun 22.
By:
  • Paggetti J
  • Haderk F
  • Seiffert M
  • Janji B
  • Distler U
  • Ammerlaan W
  • Kim YJ
  • Adam J
  • Lichter P
  • Solary E
  • Berchem G
  • Moussay E.

Screening protein isoforms predictive for cancer using immuno-affinity capture and fast LC-MS in PRM mode.

  • Discovery Proteomics
  • Clinical Proteomics
  • Tumor Microenvironment
August 01, 2015
2015 Aug. Proteomics Clin Appl.9(7-8):695-705. Epub 2015 Mar 30.
By:
  • Lesur A
  • Ancheva L
  • Kim YJ
  • Berchem G
  • van Oostrum J
  • Domon B.

Verification of the biomarker candidates for non-small-cell lung cancer using a targeted proteomics approach.

  • Clinical Proteomics
  • Tumor Stroma Interactions
  • Discovery Proteomics
March 06, 2015
2015 Mar. J Proteome Res.14(3):1412-9. Epub 2015 Feb 9.
By:
  • Kim YJ
  • Sertamo K
  • Pierrard MA
  • Mesmin C
  • Kim SY
  • Schlesser M
  • Berchem G
  • Domon B.